No Effect of Sediment Resuspension on Pelagic Nitrogen Fixation in a Danish Fjord

PRJNA1238068 · illumina_amplicon · Created 2026-08-19

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Project metadata
Project Title
No Effect of Sediment Resuspension on Pelagic Nitrogen Fixation in a Danish Fjord
Organism
marine metagenome, marine sediment metagenome
Organization
University of Southern Denmark
SRA Runs
20
Samples
20
Data
1,081,679 reads, 0.54 Gbp
Description
The diazotrophic community, primarily composed of Proteobacteria related to sulfate-reducing bacteria, was well-represented in the pelagic environment, likely sustaining observed nitrogen fixation rates. These findings highlight the importance of environmental conditions in regulating pelagic nitrogen fixation and contribute to nitrogen budget assessments for the Danish Baltic Sea.
Selected data types
PlatformILLUMINA
StrategyAMPLICON
SourceGENOMIC
Runs20
Data0.54 Gbp
2

Pipeline Analysis

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Processed with illumina_amplicon on Alliance Canada HPC.

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Assays and primers used

inferred primers

Forward
TGYGAYCCNAARGCNGA
Reverse
ADNGCCATCATYTCNCC
Samples
20 · primers in 99.8% of reads, median across the assay's samples

3,041 ASVs across the run.

Pipeline info

Container image

illumina-amplicon
865e99d13932
Cluster
grex