Environmental DNA from mesozooplankton in the South Sea of Korea

PRJNA1081627 · illumina_amplicon · Created 2026-08-18

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Project metadata
Project Title
Environmental DNA from mesozooplankton in the South Sea of Korea
Organism
marine metagenome
Organization
Research center for fishery resource management based on the information and communication technology
SRA Runs
10
Samples
10
Data
19,529,491 reads, 11.76 Gbp
Description
To validate the utility of mtCOI as a DNA marker by observing eDNA using two different nets in the South Sea of Korea and assessment of ecosystem targeted mesozooplankton.
Selected data types
PlatformILLUMINA
StrategyAMPLICON
SourceMETAGENOMIC
Runs10
Data11.76 Gbp
2

Pipeline Analysis

Done

Processed with illumina_amplicon on Alliance Canada HPC.

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Assays and primers used

inferred primers

Forward
GWACWGGWTGAACWGTWTAYCCYCCNY
Reverse
AAACTTCAGGGTGACCAAAAAAYCARA
Samples
10 · primers in 99.9% of reads, median across the assay's samples
Pipeline info

Container image

illumina-amplicon
05f23de10d82
Cluster
grex