Comparison of teleo and miFish barcodes

PRJNA894161 · illumina_amplicon · Created 2026-08-19

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1

Data Selected

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Project metadata

Project Title: Comparison of teleo and miFish barcodes
Organism: fish metagenome, marine metagenome
Organization: AZTI
SRA Runs: 60
Samples: 30
Data: 6,958,587 reads, 3.49 Gbp
Description: Comparison of teleo and miFish barcodes

Selected data types

Platform	ILLUMINA
Strategy	AMPLICON
Source	METAGENOMIC
Runs	60
Data	3.49 Gbp

2

Pipeline Analysis

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Processed with illumina_amplicon on Alliance Canada HPC.

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Assays and primers used

inferred primers

Forward: GTCGGTAAAACTCGTGCCAGCCAC
Reverse
Samples: 30 · primers in 79.6% of reads, median across the assay's samples

inferred primers

Forward: ACACCGCCCGTCACTC
Reverse
Samples: 20 · primers in 96.5% of reads, median across the assay's samples

bacterial 16S rRNA · bacterial 16S 1396

Forward: ACACCGCCCGTCACTC
Reverse
Samples: 10 · primers in 86.9% of reads, median across the assay's samples

3,725 ASVs across the run.

Pipeline info

Container image

illumina-amplicon: 9ffda89262b7
Cluster: grex